Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | D0A42_11405 | Not Available | Negative | 2525994 - 2526792 | 30721.2 |
| sigma-54-dependent fis family transcriptional regulator | D0A42_11410 | Not Available | Negative | 2527185 - 2529227 | 75094.2 |
| carbohydrate kinase family protein | D0A42_11415 | Not Available | Negative | 2529828 - 2530760 | 34613.1 |
| rod shape-determining protein | D0A42_11420 | Not Available | Positive | 2531037 - 2532083 | 37399.3 |
| rod shape-determining protein mrec | D0A42_11430 | Not Available | Positive | 2532416 - 2533771 | 46061.5 |
| rod shape-determining protein mred | D0A42_11435 | Not Available | Positive | 2533768 - 2534253 | 17924.7 |
| penicillin-binding protein 2 | D0A42_11440 | Not Available | Positive | 2534257 - 2536317 | 74862.1 |
| rod shape-determining protein roda | D0A42_11445 | Not Available | Positive | 2536314 - 2537432 | 40018.1 |
| type iv secretory system conjugative dna transfer family protein | D0A42_11450 | Not Available | Positive | 2538052 - 2539425 | 51470.1 |
| hypothetical protein | D0A42_11455 | Not Available | Positive | 2539513 - 2539935 | 16259.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

