Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | D0A42_11355 | Not Available | Positive | 2510937 - 2511842 | 33404.3 |
| m1 family peptidase | D0A42_11360 | Not Available | Positive | 2511839 - 2513866 | 73731.7 |
| hypothetical protein | D0A42_11365 | Not Available | Positive | 2514492 - 2515211 | 25972.8 |
| had family hydrolase | D0A42_11370 | Not Available | Positive | 2515251 - 2515838 | 21054.2 |
| pqq-dependent dehydrogenase, methanol/ethanol family | D0A42_11375 | Not Available | Positive | 2516830 - 2518695 | 66836.0 |
| quinoprotein dehydrogenase-associated putative abc transporter substrate-binding protein | D0A42_11380 | Not Available | Positive | 2518692 - 2520446 | 61572.1 |
| hypothetical protein | D0A42_11385 | Not Available | Positive | 2520394 - 2521113 | 24551.8 |
| hypothetical protein | D0A42_11390 | Not Available | Positive | 2521110 - 2522156 | 36381.4 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | D0A42_11395 | Not Available | Positive | 2522191 - 2523297 | 38689.8 |
| tonb-dependent receptor | D0A42_11400 | Not Available | Positive | 2523308 - 2525692 | 85401.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

