Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zipa | D0A42_10715 | Not Available | Positive | 2367394 - 2368128 | 26955.5 |
| pyridoxal phosphate-dependent aminotransferase | D0A42_10720 | Not Available | Negative | 2368310 - 2369572 | 44799.4 |
| dna ligase (nad(+)) liga | D0A42_10725 | Not Available | Positive | 2369621 - 2372122 | 90352.9 |
| ef-p lysine aminoacylase genx | D0A42_10730 | Not Available | Positive | 2372119 - 2373093 | 36044.2 |
| duf3011 domain-containing protein | D0A42_10735 | Not Available | Positive | 2373265 - 2373891 | 23329.7 |
| s-methyl-5-thioribose-1-phosphate isomerase | D0A42_10740 | Not Available | Positive | 2373939 - 2375003 | 37411.8 |
| dna gyrase subunit a | D0A42_10745 | Not Available | Positive | 2375213 - 2377912 | 98944.2 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | D0A42_10750 | Not Available | Positive | 2378105 - 2380576 | 88384.3 |
| hypothetical protein | D0A42_10755 | Not Available | Negative | 2380797 - 2381534 | 26926.8 |
| urocanate hydratase | D0A42_10760 | Not Available | Negative | 2381708 - 2383375 | 60111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

