Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | D0A42_10355 | Not Available | Positive | 2292175 - 2292732 | 20211.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D0A42_10360 | Not Available | Positive | 2292893 - 2293786 | 31228.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | D0A42_10365 | Not Available | Positive | 2293811 - 2295157 | 48717.9 |
| protein slyx | D0A42_10370 | Not Available | Positive | 2295150 - 2295386 | 8821.34 |
| duf2058 family protein | D0A42_10375 | Not Available | Positive | 2295387 - 2296082 | 25190.0 |
| transporter | D0A42_10380 | Not Available | Positive | 2296336 - 2297172 | 29590.3 |
| laci family dna-binding transcriptional regulator | D0A42_10385 | Not Available | Positive | 2297486 - 2298526 | 36507.4 |
| l-fucose:h+ symporter permease | D0A42_10390 | Not Available | Positive | 2298540 - 2299850 | 46496.8 |
| carbohydrate kinase | D0A42_10395 | Not Available | Positive | 2299775 - 2300833 | 37133.5 |
| age family epimerase/isomerase | D0A42_10400 | Not Available | Positive | 2300830 - 2302035 | 46535.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

