Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_10140 | Not Available | Negative | 2245496 - 2245813 | 11926.9 |
| hypothetical protein | D0A42_10145 | Not Available | Positive | 2246926 - 2247114 | 6776.53 |
| hypothetical protein | D0A42_10150 | Not Available | Negative | 2247128 - 2247358 | 8536.08 |
| site-specific integrase | D0A42_10155 | Not Available | Negative | 2247361 - 2248749 | 51204.2 |
| Tmrna,resume consensus sequence (at 87): tttagttgccaacgacga | Not Available | Not Available | Positive | 2249049 - 2249445 | Not Available |
| serine peptidase | D0A42_10165 | Not Available | Positive | 2249579 - 2252038 | 89119.3 |
| ssra-binding protein smpb | D0A42_10170 | Not Available | Negative | 2252263 - 2252766 | 19225.2 |
| type ii toxin-antitoxin system rata family toxin | D0A42_10175 | Not Available | Positive | 2252827 - 2253258 | 16158.3 |
| rnfh family protein | D0A42_10180 | Not Available | Positive | 2253261 - 2253557 | 10420.5 |
| outer membrane protein assembly factor bame | D0A42_10185 | Not Available | Negative | 2253780 - 2254175 | 14881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

