Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase subunit alpha | D0A42_09960 | Not Available | Negative | 2212973 - 2213848 | 29614.0 |
| succinyl-coa ligase subunit beta | D0A42_09965 | Not Available | Negative | 2213873 - 2215042 | 41418.9 |
| sensor histidine kinase | D0A42_09970 | Not Available | Positive | 2215276 - 2216886 | 58721.3 |
| sigma-54-dependent fis family transcriptional regulator | D0A42_09975 | Not Available | Positive | 2217086 - 2218489 | 50684.1 |
| type iv-a pilus assembly atpase pilb | D0A42_09985 | Not Available | Negative | 2218908 - 2220641 | 62798.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D0A42_09990 | Not Available | Negative | 2220857 - 2221276 | 14041.0 |
| type ii secretion system f family protein | D0A42_09995 | Not Available | Positive | 2221630 - 2222889 | 46033.4 |
| prepilin peptidase | D0A42_10000 | Not Available | Positive | 2222896 - 2223759 | 31904.7 |
| dephospho-coa kinase | D0A42_10005 | Not Available | Positive | 2223773 - 2224396 | 22105.6 |
| type i toxin-antitoxin system syme family toxin | D0A42_10015 | Not Available | Positive | 2224895 - 2225329 | 16001.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

