Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D0A42_09705 | Not Available | Positive | 2146138 - 2148525 | 84899.4 |
| tonb-dependent receptor | D0A42_09710 | Not Available | Positive | 2148859 - 2151258 | 85472.9 |
| cytochrome p450 | D0A42_09715 | Not Available | Negative | 2151361 - 2152554 | 44251.6 |
| kef family k(+) transporter | D0A42_09720 | Not Available | Positive | 2153626 - 2155323 | 59314.6 |
| 4-hydroxy-2-oxovalerate aldolase | D0A42_09725 | Not Available | Positive | 2155516 - 2156277 | 27016.0 |
| tonb-dependent siderophore receptor | D0A42_09730 | Not Available | Positive | 2156278 - 2158407 | 78829.3 |
| siderophore biosynthesis protein pvsa | D0A42_09735 | Not Available | Positive | 2158593 - 2159819 | 44866.6 |
| iuca/iucc family siderophore biosynthesis protein | D0A42_09740 | Not Available | Positive | 2159816 - 2161618 | 66190.5 |
| mfs transporter | D0A42_09745 | Not Available | Positive | 2161615 - 2162793 | 40765.6 |
| iron transporter | D0A42_09750 | Not Available | Positive | 2162771 - 2164540 | 64768.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

