Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline-quinone synthase | D0A42_09400 | Not Available | Positive | 2078313 - 2079065 | 28235.8 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | D0A42_09405 | Not Available | Positive | 2079062 - 2079340 | 10300.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | D0A42_09410 | Not Available | Positive | 2079337 - 2080467 | 40751.6 |
| hypothetical protein | D0A42_09415 | Not Available | Positive | 2080528 - 2081040 | 18760.6 |
| pqaa | D0A42_09420 | Not Available | Positive | 2081284 - 2082789 | 54599.0 |
| glucokinase | D0A42_09425 | Not Available | Positive | 2083132 - 2084166 | 36122.4 |
| tonb-dependent receptor | D0A42_09430 | Not Available | Positive | 2084273 - 2086909 | 95915.4 |
| atp-dependent rna helicase hrpa | D0A42_09435 | Not Available | Negative | 2087161 - 2091276 | 151768.0 |
| dna starvation/stationary phase protection protein | D0A42_09440 | Not Available | Positive | 2091364 - 2091915 | 20371.0 |
| dna helicase recq | D0A42_09445 | Not Available | Positive | 2092270 - 2094072 | 66861.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

