Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_09180 | Not Available | Positive | 2022147 - 2022245 | 3735.61 |
| hypothetical protein | D0A42_09190 | Not Available | Negative | 2022350 - 2022619 | 9651.53 |
| type iii secretion system effector protein xopk | D0A42_09200 | Not Available | Negative | 2023446 - 2025785 | 81472.0 |
| hypothetical protein | D0A42_09205 | Not Available | Negative | 2026541 - 2026801 | 9844.82 |
| restriction endonuclease subunit s | D0A42_09210 | Not Available | Positive | 2026962 - 2027558 | 21952.9 |
| type i restriction-modification system subunit m | D0A42_09215 | Not Available | Positive | 2027576 - 2029084 | 57179.3 |
| damage-inducible protein d | D0A42_09220 | Not Available | Positive | 2029071 - 2029931 | 31754.6 |
| restriction endonuclease subunit s | D0A42_09225 | Not Available | Positive | 2030199 - 2031446 | 46319.6 |
| type i restriction endonuclease subunit r | D0A42_09230 | Not Available | Positive | 2031443 - 2034733 | 122499.0 |
| m48 family peptidase | D0A42_09235 | Not Available | Positive | 2034730 - 2035476 | 28899.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

