Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | D0A42_08910 | Not Available | Positive | 1943894 - 1944667 | 26587.4 |
| acyltransferase | D0A42_08915 | Not Available | Negative | 1944701 - 1945786 | 39235.7 |
| nad(p)-dependent oxidoreductase | D0A42_08920 | Not Available | Negative | 1945843 - 1947141 | 46095.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | D0A42_08925 | Not Available | Negative | 1947138 - 1947719 | 21626.7 |
| sdr family oxidoreductase | D0A42_08930 | Not Available | Negative | 1947716 - 1948765 | 37620.7 |
| glucose-1-phosphate cytidylyltransferase | D0A42_08935 | Not Available | Negative | 1948770 - 1949543 | 28917.6 |
| glycosyltransferase family 1 protein | D0A42_08940 | Not Available | Negative | 1949598 - 1950782 | 44223.8 |
| nad(p)/fad-dependent oxidoreductase | D0A42_08945 | Not Available | Positive | 1951028 - 1952203 | 40525.6 |
| hypothetical protein | D0A42_08950 | Not Available | Positive | 1952194 - 1952502 | 11993.4 |
| stress-induced protein | D0A42_08955 | Not Available | Positive | 1952714 - 1952971 | 9064.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

