Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D0A42_08810 | Not Available | Positive | 1921307 - 1923925 | 95048.7 |
| hypothetical protein | D0A42_08815 | Not Available | Positive | 1924006 - 1924221 | 7784.03 |
| sdr family nad(p)-dependent oxidoreductase | D0A42_08820 | Not Available | Negative | 1924359 - 1925237 | 30814.9 |
| cytochrome p450 | D0A42_08825 | Not Available | Positive | 1925453 - 1926805 | 50391.3 |
| duf4142 domain-containing protein | D0A42_08830 | Not Available | Positive | 1926802 - 1927497 | 24430.3 |
| hypothetical protein | D0A42_08835 | Not Available | Positive | 1927501 - 1928046 | 19839.8 |
| glutathione-dependent formaldehyde dehydrogenase | D0A42_08840 | Not Available | Positive | 1928043 - 1929212 | 42196.0 |
| duf1264 domain-containing protein | D0A42_08845 | Not Available | Negative | 1929274 - 1930014 | 27002.0 |
| exodeoxyribonuclease iii | D0A42_08850 | Not Available | Positive | 1930188 - 1931258 | 39005.4 |
| hypothetical protein | D0A42_08855 | Not Available | Negative | 1931255 - 1931530 | 10166.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

