Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_08245 | Not Available | Negative | 1784097 - 1784957 | 29383.4 |
| rna polymerase sigma factor rpoe | D0A42_08250 | Not Available | Negative | 1784954 - 1785574 | 23949.3 |
| 3-hydroxyacyl-coa dehydrogenase | D0A42_08255 | Not Available | Positive | 1785811 - 1787883 | 73605.6 |
| cation transporter | D0A42_08260 | Not Available | Negative | 1788066 - 1789031 | 34443.6 |
| 3-hydroxyisobutyrate dehydrogenase | D0A42_08270 | Not Available | Negative | 1789581 - 1790468 | 29503.9 |
| enoyl-coa hydratase/isomerase family protein | D0A42_08275 | Not Available | Negative | 1790485 - 1791624 | 40146.8 |
| enoyl-coa hydratase | D0A42_08280 | Not Available | Negative | 1791657 - 1792454 | 28204.5 |
| acyl-coa dehydrogenase | D0A42_08285 | Not Available | Negative | 1792451 - 1793632 | 42359.4 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | D0A42_08290 | Not Available | Negative | 1793648 - 1795153 | 52755.8 |
| xre family transcriptional regulator | D0A42_08295 | Not Available | Positive | 1795279 - 1796661 | 51133.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

