Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response endonuclease pdem | D0A42_08145 | Not Available | Positive | 1764163 - 1764795 | 23031.0 |
| fad-dependent monooxygenase | D0A42_08150 | Not Available | Negative | 1764893 - 1766164 | 46645.1 |
| cold-shock protein | D0A42_08155 | Not Available | Negative | 1766261 - 1766467 | 7293.39 |
| s-methyl-5'-thioinosine phosphorylase | D0A42_08160 | Not Available | Negative | 1766554 - 1767306 | 26217.5 |
| hypoxanthine-guanine phosphoribosyltransferase | D0A42_08165 | Not Available | Negative | 1767395 - 1767949 | 20152.2 |
| beta-n-acetylhexosaminidase | D0A42_08170 | Not Available | Negative | 1767949 - 1768944 | 34518.1 |
| cryptochrome/photolyase family protein | D0A42_08175 | Not Available | Negative | 1769352 - 1770941 | 60350.6 |
| fad-binding protein | D0A42_08180 | Not Available | Negative | 1771112 - 1772179 | 37146.3 |
| dsba family oxidoreductase | D0A42_08185 | Not Available | Negative | 1772148 - 1772849 | 24678.6 |
| cyth domain-containing protein | D0A42_08190 | Not Available | Negative | 1772925 - 1773419 | 18275.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

