Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | D0A42_07665 | Not Available | Positive | 1669664 - 1670491 | 30170.2 |
| elongation factor ts | D0A42_07670 | Not Available | Positive | 1670662 - 1671540 | 30979.2 |
| ggdef domain-containing protein | D0A42_07675 | Not Available | Positive | 1671825 - 1673348 | 56103.2 |
| ump kinase | D0A42_07680 | Not Available | Positive | 1673456 - 1674178 | 25753.4 |
| ribosome-recycling factor | D0A42_07685 | Not Available | Positive | 1674415 - 1674972 | 20450.6 |
| di-trans,poly-cis-decaprenylcistransferase | D0A42_07690 | Not Available | Positive | 1674975 - 1675751 | 28478.0 |
| phosphatidate cytidylyltransferase | D0A42_07695 | Not Available | Positive | 1675748 - 1676575 | 28999.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D0A42_07700 | Not Available | Positive | 1676578 - 1677768 | 41118.4 |
| rip metalloprotease rsep | D0A42_07705 | Not Available | Positive | 1677795 - 1679141 | 48165.9 |
| outer membrane protein assembly factor bama | D0A42_07710 | Not Available | Positive | 1679138 - 1681594 | 90704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

