Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | D0A42_07295 | Not Available | Positive | 1584526 - 1586223 | 60977.6 |
| hypothetical protein | D0A42_07300 | Not Available | Negative | 1586240 - 1586485 | 8721.9 |
| ggdef domain-containing protein | D0A42_07305 | Not Available | Positive | 1586723 - 1587697 | 35384.4 |
| efflux transporter outer membrane subunit | D0A42_07310 | Not Available | Negative | 1587792 - 1589216 | 51223.5 |
| sdr family oxidoreductase | D0A42_07315 | Not Available | Negative | 1589210 - 1589941 | 26123.4 |
| multidrug efflux rnd transporter permease subunit | D0A42_07320 | Not Available | Negative | 1589975 - 1593145 | 113378.0 |
| efflux rnd transporter periplasmic adaptor subunit | D0A42_07325 | Not Available | Negative | 1593327 - 1594517 | 42927.1 |
| sdr family oxidoreductase | D0A42_07330 | Not Available | Negative | 1594514 - 1595332 | 28121.2 |
| hypothetical protein | D0A42_07335 | Not Available | Negative | 1595284 - 1595511 | 7980.9 |
| lysr family transcriptional regulator | D0A42_07340 | Not Available | Positive | 1595641 - 1596675 | 37979.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

