Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | D0A42_06980 | Not Available | Positive | 1498531 - 1499247 | 24757.8 |
| carbamoyl-phosphate synthase small subunit | D0A42_06985 | Not Available | Positive | 1499487 - 1500614 | 40267.1 |
| hypothetical protein | D0A42_06990 | Not Available | Positive | 1500614 - 1501165 | 18760.6 |
| carbamoyl-phosphate synthase large subunit | D0A42_06995 | Not Available | Positive | 1501223 - 1504465 | 117333.0 |
| transcription elongation factor grea | D0A42_07000 | Not Available | Positive | 1504462 - 1504938 | 17209.5 |
| phosphoglycerate mutase | D0A42_07005 | Not Available | Positive | 1504942 - 1505862 | 33604.3 |
| single-stranded-dna-specific exonuclease recj | D0A42_07010 | Not Available | Positive | 1505859 - 1507598 | 61696.6 |
| duf1176 domain-containing protein | D0A42_07015 | Not Available | Negative | 1507686 - 1508714 | 36069.2 |
| acyltransferase | D0A42_07020 | Not Available | Negative | 1508804 - 1510168 | 50743.9 |
| hypothetical protein | D0A42_07025 | Not Available | Negative | 1510242 - 1511087 | 32311.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

