Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | D0A42_06830 | Not Available | Positive | 1469677 - 1470804 | 41782.5 |
| imidazole glycerol phosphate synthase subunit hish | D0A42_06835 | Not Available | Positive | 1470801 - 1471403 | 21245.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | D0A42_06840 | Not Available | Positive | 1471400 - 1472134 | 25730.8 |
| imidazole glycerol phosphate synthase cyclase subunit | D0A42_06845 | Not Available | Positive | 1472128 - 1472904 | 28354.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | D0A42_06850 | Not Available | Positive | 1472894 - 1473514 | 22149.4 |
| hypothetical protein | D0A42_06855 | Not Available | Negative | 1473678 - 1473881 | 7402.14 |
| calcineurin phosphoesterase | D0A42_06860 | Not Available | Positive | 1474159 - 1475745 | 57585.9 |
| peptidase c13 | D0A42_06865 | Not Available | Negative | 1475937 - 1477139 | 43108.2 |
| acireductone synthase | D0A42_06870 | Not Available | Negative | 1477342 - 1478040 | 26099.6 |
| acireductone dioxygenase | D0A42_06875 | Not Available | Negative | 1478043 - 1478609 | 21433.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

