Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium transporter | D0A42_06665 | Not Available | Positive | 1434607 - 1436169 | 56220.6 |
| eal domain-containing protein | D0A42_06670 | Not Available | Negative | 1436250 - 1438106 | 67670.2 |
| glycoside hydrolase family 5 protein | D0A42_06675 | Not Available | Positive | 1438533 - 1439534 | 35842.4 |
| dna-binding response regulator | D0A42_06680 | Not Available | Negative | 1439856 - 1440431 | 21009.2 |
| sensor histidine kinase | D0A42_06685 | Not Available | Negative | 1440428 - 1441657 | 44035.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | D0A42_06690 | Not Available | Positive | 1441776 - 1443041 | 45250.4 |
| pap2 family protein | D0A42_06695 | Not Available | Positive | 1443022 - 1443753 | 27007.1 |
| aspartate/glutamate racemase family protein | D0A42_06705 | Not Available | Negative | 1445353 - 1446057 | 25107.4 |
| dmt family transporter | D0A42_06710 | Not Available | Negative | 1446203 - 1447114 | 33105.3 |
| udp-n-acetylmuramate dehydrogenase | D0A42_06715 | Not Available | Negative | 1447108 - 1448160 | 37677.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

