Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | D0A42_06460 | Not Available | Negative | 1383687 - 1384517 | 29095.0 |
| hypothetical protein | D0A42_06465 | Not Available | Negative | 1384569 - 1385048 | 16860.9 |
| phoh family protein | D0A42_06470 | Not Available | Negative | 1385048 - 1386445 | 52359.5 |
| peroxiredoxin | D0A42_06475 | Not Available | Negative | 1386528 - 1387010 | 17278.7 |
| ribonuclease e inhibitor rrab | D0A42_06480 | Not Available | Negative | 1387049 - 1387387 | 13003.0 |
| glycine cleavage system transcriptional regulator | D0A42_06485 | Not Available | Negative | 1387413 - 1388039 | 22905.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | D0A42_06490 | Not Available | Positive | 1388132 - 1389040 | 31102.2 |
| hypothetical protein | D0A42_06495 | Not Available | Positive | 1389057 - 1389575 | 17464.9 |
| ferredoxin family protein | D0A42_06500 | Not Available | Negative | 1389652 - 1389975 | 11821.1 |
| 2-dehydro-3-deoxygalactonokinase | D0A42_06505 | Not Available | Negative | 1390191 - 1391069 | 31177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

