Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | D0A42_06000 | Not Available | Positive | 1307971 - 1308585 | 22379.0 |
| lysm peptidoglycan-binding domain-containing protein | D0A42_06005 | Not Available | Positive | 1308564 - 1309364 | 27542.0 |
| hypothetical protein | D0A42_06010 | Not Available | Negative | 1309571 - 1309945 | 13386.2 |
| ribosome assembly rna-binding protein yhby | D0A42_06015 | Not Available | Negative | 1309962 - 1310267 | 11205.7 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | D0A42_06020 | Not Available | Positive | 1310333 - 1310965 | 23412.6 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | D0A42_06025 | Not Available | Positive | 1311021 - 1312967 | 70742.3 |
| dihydropteroate synthase | D0A42_06030 | Not Available | Positive | 1313274 - 1314182 | 31863.3 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | D0A42_06035 | Not Available | Positive | 1314182 - 1315165 | 35603.2 |
| rna-binding protein hfq | D0A42_06040 | Not Available | Positive | 1315242 - 1315520 | 10204.1 |
| gtpase hflx | D0A42_06045 | Not Available | Positive | 1315532 - 1316851 | 48784.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

