Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1653 domain-containing protein | D0A42_05685 | Not Available | Positive | 1245846 - 1246082 | 9080.22 |
| hypothetical protein | D0A42_05690 | Not Available | Negative | 1246118 - 1246336 | 8086.52 |
| hypothetical protein | D0A42_05695 | Not Available | Positive | 1246377 - 1246622 | 9196.1 |
| dna/rna non-specific endonuclease | D0A42_05705 | Not Available | Negative | 1247086 - 1247823 | 26540.2 |
| pas domain s-box protein | D0A42_05710 | Not Available | Positive | 1248664 - 1251531 | 104353.0 |
| response regulator | D0A42_05715 | Not Available | Negative | 1251554 - 1251928 | 13534.4 |
| circadian clock protein kaic | D0A42_05720 | Not Available | Positive | 1252076 - 1253617 | 56403.9 |
| hybrid sensor histidine kinase/response regulator | D0A42_05725 | Not Available | Positive | 1253574 - 1255676 | 75618.7 |
| tetratricopeptide repeat protein | D0A42_05730 | Not Available | Negative | 1255714 - 1256442 | 25335.0 |
| cytochrome c-type biogenesis protein ccmh | D0A42_05735 | Not Available | Negative | 1256439 - 1256891 | 16953.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

