Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D0A42_05215 | Not Available | Negative | 1153411 - 1154109 | 24491.2 |
| methionine import atp-binding protein metn | D0A42_05220 | Not Available | Negative | 1154106 - 1155113 | 36480.1 |
| dmt family transporter | D0A42_05225 | Not Available | Negative | 1155253 - 1156161 | 32419.0 |
| yajq family cyclic di-gmp-binding protein | D0A42_05230 | Not Available | Positive | 1156419 - 1156904 | 18202.8 |
| duf1415 domain-containing protein | D0A42_05235 | Not Available | Positive | 1157074 - 1157634 | 20644.2 |
| hypothetical protein | D0A42_05240 | Not Available | Negative | 1157761 - 1159194 | 51374.1 |
| tonb-dependent receptor | D0A42_05245 | Not Available | Negative | 1159194 - 1161797 | 95429.9 |
| sdr family oxidoreductase | D0A42_05250 | Not Available | Positive | 1162045 - 1162851 | 28296.9 |
| had family phosphatase | D0A42_05255 | Not Available | Negative | 1163056 - 1163733 | 23833.1 |
| rrna pseudouridine synthase | D0A42_05260 | Not Available | Negative | 1163730 - 1164443 | 25781.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

