Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D0A42_05060 | Not Available | Positive | 1123693 - 1124913 | 44668.8 |
| hypothetical protein | D0A42_05065 | Not Available | Positive | 1125018 - 1125503 | 16721.3 |
| sigma-54-dependent fis family transcriptional regulator | D0A42_05070 | Not Available | Positive | 1125675 - 1127018 | 48853.3 |
| sensor histidine kinase | D0A42_05075 | Not Available | Positive | 1127023 - 1128375 | 50729.2 |
| right-handed parallel beta-helix repeat-containing protein | D0A42_05085 | Not Available | Negative | 1128629 - 1129696 | 38552.4 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | D0A42_05090 | Not Available | Negative | 1129697 - 1131061 | 48150.7 |
| gtra family protein | D0A42_05095 | Not Available | Positive | 1131180 - 1131593 | 14838.4 |
| hypothetical protein | D0A42_05100 | Not Available | Negative | 1131727 - 1131924 | 6991.59 |
| chorismate mutase | D0A42_05105 | Not Available | Negative | 1132054 - 1132623 | 20071.9 |
| f0f1 atp synthase subunit epsilon | D0A42_05110 | Not Available | Negative | 1132807 - 1133229 | 15162.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

