Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa--3-ketoacid coa transferase subunit b | D0A42_04755 | Not Available | Negative | 1059141 - 1059782 | 22345.1 |
| succinyl-coa--3-ketoacid coa transferase subunit a | D0A42_04760 | Not Available | Negative | 1059782 - 1060510 | 25815.9 |
| phosphohexose mutase | D0A42_04765 | Not Available | Positive | 1060645 - 1061991 | 48894.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | D0A42_04770 | Not Available | Positive | 1062037 - 1063440 | 50978.5 |
| dtdp-4-dehydrorhamnose reductase | D0A42_04775 | Not Available | Negative | 1063562 - 1064470 | 32195.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | D0A42_04780 | Not Available | Negative | 1064467 - 1065024 | 20518.3 |
| glucose-1-phosphate thymidylyltransferase | D0A42_04785 | Not Available | Negative | 1065021 - 1065908 | 32509.8 |
| dtdp-glucose 4,6-dehydratase | D0A42_04790 | Not Available | Negative | 1065972 - 1067027 | 38575.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | D0A42_04795 | Not Available | Positive | 1067256 - 1068002 | 26497.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | D0A42_04800 | Not Available | Positive | 1068002 - 1068946 | 31836.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

