Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | D0A42_04640 | Not Available | Positive | 1035129 - 1035554 | 15877.9 |
| atpase | D0A42_04645 | Not Available | Positive | 1035564 - 1036796 | 46429.2 |
| valine--trna ligase | D0A42_04655 | Not Available | Positive | 1037594 - 1040428 | 106131.0 |
| hypothetical protein | D0A42_04660 | Not Available | Negative | 1040571 - 1040786 | 7468.09 |
| pectate lyase | D0A42_04665 | Not Available | Negative | 1041007 - 1042149 | 40295.0 |
| pectate lyase | D0A42_04670 | Not Available | Negative | 1042387 - 1043520 | 40164.9 |
| ribosomal-protein-alanine n-acetyltransferase | D0A42_04675 | Not Available | Negative | 1044222 - 1044695 | 17446.0 |
| alanine acetyltransferase | D0A42_04680 | Not Available | Negative | 1044701 - 1045168 | 16374.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | D0A42_04685 | Not Available | Negative | 1045165 - 1045938 | 27942.4 |
| duf4124 domain-containing protein | D0A42_04690 | Not Available | Positive | 1046107 - 1046472 | 12425.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

