Clostridium sp. OM08-29

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. OM08-29 is characterized by having a single replicon, indicating a streamlined genetic organization. Its genomic information is accessible under the accession number QUKW00000000.1, which provides a basis for understanding its genetic makeup and potential functional capabilities. As a member of the Clostridium genus, this organism is likely to exhibit anaerobic metabolism, a common trait among Clostridia, which thrive in low-oxygen environments. Although specific metabolic pathways and ecological roles for Clostridium sp. OM08-29 are not detailed, Clostridium species are generally known for their ability to degrade complex organic materials, making them significant in various ecological contexts, particularly in soil and gut microbiomes. The presence of a single replicon suggests a potential adaptation to specific environmental conditions, which may influence its survival strategies and interactions within microbial communities. This feature could also indicate evolutionary advantages in niche specialization or metabolic efficiency. In summary, Clostridium sp. OM08-29, with its single replicon and noted genomic access, exemplifies the diverse capabilities of the Clostridium genus, potentially contributing to ecological processes like organic matter decomposition and nutrient cycling in anaerobic environments. Further studies on its specific functions and interactions could enhance our understanding of its ecological role.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. OM08-29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. OM08-29 OM08-29.Scaf34, whole genome shotgun

Gene Summary

Adenine Count

953508 bp

Thymine Count

910128 bp

Guanine Count

754001 bp

Cytosine Count

690535 bp

Genome Length

3308298 bp

Protein-coding Genes

3019 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin peptidaseDXC24_03625Not AvailableNegative791893 - 79268129368.2
hypothetical proteinDXC24_03630Not AvailableNegative792694 - 79337425335.2
hypothetical proteinDXC24_03635Not AvailableNegative793393 - 79377914543.6
hypothetical proteinDXC24_03640Not AvailableNegative793781 - 79446726036.7
type ii secretion system proteinDXC24_03645Not AvailableNegative794490 - 801221241531.0
azld domain-containing proteinDXC24_03650Not AvailableNegative801344 - 80164911428.8
branched-chain amino acid abc transporter permeaseDXC24_03655Not AvailableNegative801639 - 80238826368.9
shikimate dehydrogenaseDXC24_03660Not AvailableNegative802385 - 80377951030.8
hypothetical proteinDXC24_03665Not AvailablePositive803976 - 80542754276.6
hypothetical proteinDXC24_03670Not AvailablePositive805443 - 80686753513.2

Displaying genes 771 – 780 of 3107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.