Clostridium sp. OM08-29

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. OM08-29 is characterized by having a single replicon, indicating a streamlined genetic organization. Its genomic information is accessible under the accession number QUKW00000000.1, which provides a basis for understanding its genetic makeup and potential functional capabilities. As a member of the Clostridium genus, this organism is likely to exhibit anaerobic metabolism, a common trait among Clostridia, which thrive in low-oxygen environments. Although specific metabolic pathways and ecological roles for Clostridium sp. OM08-29 are not detailed, Clostridium species are generally known for their ability to degrade complex organic materials, making them significant in various ecological contexts, particularly in soil and gut microbiomes. The presence of a single replicon suggests a potential adaptation to specific environmental conditions, which may influence its survival strategies and interactions within microbial communities. This feature could also indicate evolutionary advantages in niche specialization or metabolic efficiency. In summary, Clostridium sp. OM08-29, with its single replicon and noted genomic access, exemplifies the diverse capabilities of the Clostridium genus, potentially contributing to ecological processes like organic matter decomposition and nutrient cycling in anaerobic environments. Further studies on its specific functions and interactions could enhance our understanding of its ecological role.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. OM08-29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. OM08-29 OM08-29.Scaf34, whole genome shotgun

Gene Summary

Adenine Count

953508 bp

Thymine Count

910128 bp

Guanine Count

754001 bp

Cytosine Count

690535 bp

Genome Length

3308298 bp

Protein-coding Genes

3019 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp endopeptidase proteolytic subunit clppDXC24_03120Not AvailableNegative675652 - 67625121893.2
alanine--trna ligaseDXC24_03125Not AvailableNegative676286 - 67892596647.0
phosphoribosyl-amp cyclohydrolaseDXC24_03130Not AvailableNegative679076 - 67944413749.4
imidazoleglycerol-phosphate dehydratase hisbDXC24_03135Not AvailableNegative679470 - 68006321689.0
histidinol dehydrogenaseDXC24_03140Not AvailableNegative680079 - 68137147088.8
atp phosphoribosyltransferaseDXC24_03145Not AvailableNegative681416 - 68205423872.2
atp phosphoribosyltransferase regulatory subunitDXC24_03150Not AvailableNegative682064 - 68327246114.9
transcriptional repressor lexaDXC24_03155Not AvailablePositive683466 - 68409223463.3
hypothetical proteinDXC24_03160Not AvailableNegative684204 - 68453312791.5
hd-gyp domain-containing proteinDXC24_03165Not AvailableNegative684554 - 68577746357.9

Displaying genes 671 – 680 of 3107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.