Ruminococcaceae bacterium TF06-43

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium TF06-43 is a bacterium belonging to the family Ruminococcaceae. It is characterized by having a single replicon, indicating a streamlined genomic structure. The genome of this bacterium is documented under the accession number QUKQ00000000.1, which facilitates its identification and provides a reference for further research. As a member of the Ruminococcaceae family, TF06-43 is likely involved in the fermentation processes within the gut microbiome, particularly in ruminant animals, where it may contribute to the breakdown of complex carbohydrates. This role is essential for nutrient absorption and overall digestive health in these hosts. The presence of Ruminococcaceae species in the gut is generally associated with beneficial functions, including the production of short-chain fatty acids, which are vital for maintaining gut health and supporting the immune system. In ecological contexts, Ruminococcaceae bacterium TF06-43 may play a significant role in the microbial community dynamics of the gastrointestinal tract, influencing the composition and functioning of the microbiome. Its interactions with other microbial species and its contributions to metabolic processes underscore the complexity of microbial life and its impact on host health. Understanding the characteristics and functions of Ruminococcaceae bacterium TF06-43 can provide insights into the broader ecological roles of gut microbiota in ruminants and their potential implications for animal husbandry and health management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium TF06-43 TF06-43.Scaf147, whole genome

Gene Summary

Adenine Count

746112 bp

Thymine Count

746065 bp

Guanine Count

934261 bp

Cytosine Count

940962 bp

Genome Length

3368907 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f420-0--gamma-glutamyl ligaseDXC62_00020Not AvailableNegative4104 - 528242472.6
lysr family transcriptional regulatorDXC62_00025Not AvailablePositive5439 - 634433247.0
sodium:alanine symporter family proteinDXC62_00030Not AvailablePositive6727 - 814850523.7
alanine:cation symporter family proteinDXC62_00035Not AvailablePositive8650 - 1006550207.2
nad(p)h-hydrate dehydrataseDXC62_00040Not AvailableNegative10195 - 1108231312.1
giy-yig nuclease family proteinDXC62_00045Not AvailableNegative11075 - 113299553.42
pdz domain-containing proteinDXC62_00050Not AvailableNegative11331 - 1322366639.3
16s rrna (cytidine(1402)-2'-o)-methyltransferaseDXC62_00055Not AvailablePositive13222 - 1426238956.9
sam-dependent methyltransferaseDXC62_00060Not AvailablePositive14259 - 1523336875.1
ecf transporter s componentDXC62_00065Not AvailableNegative15529 - 1618823241.4

Displaying genes 41 – 50 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.