Ruminococcaceae bacterium TF06-43

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium TF06-43 is a bacterium belonging to the family Ruminococcaceae. It is characterized by having a single replicon, indicating a streamlined genomic structure. The genome of this bacterium is documented under the accession number QUKQ00000000.1, which facilitates its identification and provides a reference for further research. As a member of the Ruminococcaceae family, TF06-43 is likely involved in the fermentation processes within the gut microbiome, particularly in ruminant animals, where it may contribute to the breakdown of complex carbohydrates. This role is essential for nutrient absorption and overall digestive health in these hosts. The presence of Ruminococcaceae species in the gut is generally associated with beneficial functions, including the production of short-chain fatty acids, which are vital for maintaining gut health and supporting the immune system. In ecological contexts, Ruminococcaceae bacterium TF06-43 may play a significant role in the microbial community dynamics of the gastrointestinal tract, influencing the composition and functioning of the microbiome. Its interactions with other microbial species and its contributions to metabolic processes underscore the complexity of microbial life and its impact on host health. Understanding the characteristics and functions of Ruminococcaceae bacterium TF06-43 can provide insights into the broader ecological roles of gut microbiota in ruminants and their potential implications for animal husbandry and health management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium TF06-43 TF06-43.Scaf147, whole genome

Gene Summary

Adenine Count

746112 bp

Thymine Count

746065 bp

Guanine Count

934261 bp

Cytosine Count

940962 bp

Genome Length

3368907 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaDXC62_01800Not AvailablePositive390235 - 39083120807.6
holliday junction branch migration dna helicase ruvbDXC62_01805Not AvailablePositive391039 - 39209438332.3
phosphoglucosamine mutaseDXC62_01810Not AvailablePositive392151 - 39349747414.9
sigma-70 family rna polymerase sigma factorDXC62_01815Not AvailablePositive393565 - 39420923781.0
zinc-binding proteinDXC62_01820Not AvailablePositive394250 - 39452810466.3
duf1858 domain-containing proteinDXC62_01825Not AvailablePositive394681 - 3948937590.31
sam-dependent methyltransferaseDXC62_01830Not AvailablePositive394955 - 39566826438.8
nif3-like dinuclear metal center hexameric proteinDXC62_01835Not AvailablePositive395652 - 39643128833.5
yebc/pmpr family dna-binding transcriptional regulatorDXC62_01840Not AvailablePositive396446 - 39718026845.9
recombinaseDXC62_01845Not AvailablePositive397307 - 39819734457.3

Displaying genes 391 – 400 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.