Clostridium sp. TF11-13AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. TF11-13AC is characterized by having a single replicon, indicating a streamlined genomic structure that is typical for certain bacterial species within the Clostridia class. The genomic information for this strain can be found under the accession number QUKJ00000000.1, which allows for further exploration and analysis of its genetic makeup. As a member of the Clostridium genus, this strain is likely to exhibit anaerobic metabolic processes, which is a common trait among Clostridia. These bacteria are often associated with various ecological roles, including those in soil and gut microbiomes, where they can participate in the degradation of organic matter and contribute to nutrient cycling. Understanding the genomic characteristics of Clostridium sp. TF11-13AC may provide insights into its ecological functions and potential applications in biotechnology or environmental science. The presence of a single replicon suggests a potential for efficient replication and adaptation in its niche, which may influence its interactions with other microorganisms and its overall role in specific ecosystems. Further research could reveal additional functions and applications of this strain, contributing to the broader understanding of Clostridia's significance in both natural and engineered environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. TF11-13AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. TF11-13AC TF11-13AC.Scaf28, whole genome shotgun

Gene Summary

Adenine Count

832126 bp

Thymine Count

818489 bp

Guanine Count

802526 bp

Cytosine Count

747619 bp

Genome Length

3201111 bp

Protein-coding Genes

2747 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr01440 family proteinDXD12_12750Not AvailablePositive2727734 - 272832420928.1
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDXD12_12755Not AvailablePositive2728355 - 272987556907.7
nyn domain-containing proteinDXD12_12760Not AvailablePositive2730272 - 273113832563.6
endonuclease iiiDXD12_12765Not AvailablePositive2731298 - 273193623395.6
cpbp family intramembrane metalloproteaseDXD12_12770Not AvailablePositive2731953 - 273284333510.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDXD12_12775Not AvailablePositive2732919 - 273397439316.5
ykgj family cysteine cluster proteinDXD12_12780Not AvailablePositive2733977 - 273472028832.6
php domain-containing proteinDXD12_12785Not AvailablePositive2734816 - 273563130319.9
50s ribosomal protein l25DXD12_12790Not AvailablePositive2735867 - 273645721814.1
c4-dicarboxylate abc transporterDXD12_12795Not AvailableNegative2736630 - 273767639062.8

Displaying genes 2461 – 2470 of 2907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.