Parabacteroides sp. TM07-1AC

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. TM07-1AC is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility and ability to navigate through various environments. This organism contains a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and cellular function. The genomic data for Parabacteroides sp. TM07-1AC can be accessed through the accession number QUKD00000000.1, which provides a resource for researchers interested in further exploration of its genetic makeup and potential applications. As a member of the Parabacteroides genus, this bacterium is likely involved in the complex microbial communities found in various ecological niches, particularly within the gastrointestinal tracts of animals. Its rod shape and flagellar mobility suggest potential roles in nutrient acquisition and interaction with other microbial species. The presence of a single replicon may also imply a degree of stability and adaptability within its environment, which is crucial for survival in competitive microbial ecosystems. The ecological insights garnered from studying Parabacteroides sp. TM07-1AC may enhance our understanding of gut microbiota dynamics and their influence on host health. Further research into its functional capabilities could reveal its contributions to metabolic processes, interactions with host immune systems, and overall biodiversity within gut microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. TM07-1AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. TM07-1AC TM07-1AC.Scaf34, whole genome shotgun

Gene Summary

Adenine Count

1728089 bp

Thymine Count

1686878 bp

Guanine Count

1305100 bp

Cytosine Count

1364004 bp

Genome Length

6085081 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-c crispr-associated protein cas8c/csd1DXD68_20290Not AvailablePositive5181534 - 518328865827.4
type i-c crispr-associated protein cas7/csd2DXD68_20295Not AvailablePositive5183309 - 518417232303.3
crispr-associated protein cas4DXD68_20300Not AvailablePositive5184169 - 518483726006.7
type i-c crispr-associated endonuclease cas1DXD68_20305Not AvailablePositive5184841 - 518587538732.1
crispr-associated endonuclease cas2DXD68_20310Not AvailablePositive5185880 - 518617011299.5
crispr-associated helicase cas3'DXD68_20315Not AvailableNegative5186860 - 518909483859.8
helicaseDXD68_20320Not AvailableNegative5189218 - 519129079078.5
hu family dna-binding proteinDXD68_20325Not AvailableNegative5191448 - 519183414399.4
mfs transporterDXD68_20330Not AvailableNegative5192068 - 519328544214.6
thiol peroxidaseDXD68_20335Not AvailableNegative5193578 - 519408117870.6

Displaying genes 3971 – 3980 of 4700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.