Ruminococcus sp. AM27-16

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM27-16 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which suggests a capability for motility. The organism is noted for having a single replicon, indicative of its genetic structure and replication process. The accession number for this strain is QUJV00000000.1, which can be used for further reference in genomic databases. Ruminococcus species, including Ruminococcus sp. AM27-16, are typically found in the gastrointestinal tracts of herbivores, where they play a crucial role in the fermentation of complex carbohydrates. Their ability to break down polysaccharides is vital for the digestion of plant materials, contributing significantly to energy availability for their host organisms. This ecological role underscores the importance of Ruminococcus sp. AM27-16 in nutrient cycling within its environment, particularly in the digestive systems of ruminants. The presence of flagella may enhance its capability to colonize and thrive in the diverse microbial communities within the gut, facilitating interactions with other microorganisms and the host.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM27-16
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM27-16
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM27-16 AM27-16.Scaf76, whole genome shotgun

Gene Summary

Adenine Count

1246113 bp

Thymine Count

1241843 bp

Guanine Count

870016 bp

Cytosine Count

857167 bp

Genome Length

4215515 bp

Protein-coding Genes

3671 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4317 family proteinDW711_13425Not AvailableNegative2800478 - 280115525897.6
nitroreductaseDW711_13435Not AvailableNegative2803995 - 280453120168.1
peptidoglycan-binding proteinDW711_13440Not AvailableNegative2804594 - 280603654575.1
class ii fructose-1,6-bisphosphate aldolaseDW711_13445Not AvailableNegative2806499 - 280736230729.3
Trna-tyrNot AvailableNot AvailablePositive2807632 - 2807716Not Available
glycoside hydrolase family 13 proteinDW711_13455Not AvailableNegative2807833 - 280996882512.8
atp-dependent metallopeptidase ftsh/yme1/tma family proteinDW711_13460Not AvailableNegative2810320 - 281217367515.5
hypoxanthine phosphoribosyltransferaseDW711_13465Not AvailableNegative2812190 - 281272019853.1
trna lysidine(34) synthetase tilsDW711_13470Not AvailableNegative2812713 - 281417056002.7
stage ii sporulation protein eDW711_13475Not AvailableNegative2814204 - 281569756862.2

Displaying genes 2591 – 2600 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.