Ruminococcaceae bacterium AM28-23LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium AM28-23LB is a member of the Ruminococcaceae family, known for its significance in various ecological and biological contexts. This bacterium is characterized by having a single replicon, which may suggest a streamlined genetic organization compared to other organisms that possess multiple replicons. The accession number for this bacterium is QUJM00000000.1, which provides a reference for its genomic data and aids in further research and identification within microbial databases. The Ruminococcaceae family is typically associated with the degradation of complex carbohydrates, contributing to the fermentation processes in the gastrointestinal tracts of various animals, particularly herbivores. The ecological role of Ruminococcaceae bacterium AM28-23LB could be significant in the context of gut microbiota, where it may participate in the breakdown of plant materials, thus facilitating nutrient absorption for its host. Understanding the traits of this bacterium can contribute to the broader knowledge of microbial communities and their functions in different environments, especially in relation to digestion and nutrient cycling. The insights gained from studying this bacterium can help elucidate its potential applications in biotechnology and agriculture, particularly in enhancing digestive efficiency in livestock through microbial supplementation.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium AM28-23LB AM28-23LB.Scaf83, whole genome

Gene Summary

Adenine Count

659708 bp

Thymine Count

661971 bp

Guanine Count

803763 bp

Cytosine Count

811489 bp

Genome Length

2937492 bp

Protein-coding Genes

2803 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW741_01290Not AvailableNegative258998 - 2592619702.73
helix-turn-helix domain-containing proteinDW741_01295Not AvailableNegative259827 - 2600759476.76
sigma-70 family rna polymerase sigma factorDW741_01300Not AvailableNegative260068 - 26049316734.2
type ii-a crispr-associated protein csn2DW741_01305Not AvailableNegative261967 - 26265926809.4
crispr-associated endonuclease cas2DW741_01310Not AvailableNegative262656 - 26296111645.5
type ii crispr-associated endonuclease cas1DW741_01315Not AvailableNegative262966 - 26384133478.5
type ii crispr rna-guided endonuclease cas9DW741_01320Not AvailableNegative263838 - 267881156044.0
dna sulfur modification protein dndbDW741_01325Not AvailablePositive268357 - 26939138755.8
dna phosphorothioation system sulfurtransferase dndcDW741_01330Not AvailablePositive269384 - 27088058145.6
dna sulfur modification protein dnddDW741_01335Not AvailablePositive270897 - 27289175186.5

Displaying genes 261 – 270 of 326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.