Ruminococcaceae bacterium AM28-23LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium AM28-23LB is a member of the Ruminococcaceae family, known for its significance in various ecological and biological contexts. This bacterium is characterized by having a single replicon, which may suggest a streamlined genetic organization compared to other organisms that possess multiple replicons. The accession number for this bacterium is QUJM00000000.1, which provides a reference for its genomic data and aids in further research and identification within microbial databases. The Ruminococcaceae family is typically associated with the degradation of complex carbohydrates, contributing to the fermentation processes in the gastrointestinal tracts of various animals, particularly herbivores. The ecological role of Ruminococcaceae bacterium AM28-23LB could be significant in the context of gut microbiota, where it may participate in the breakdown of plant materials, thus facilitating nutrient absorption for its host. Understanding the traits of this bacterium can contribute to the broader knowledge of microbial communities and their functions in different environments, especially in relation to digestion and nutrient cycling. The insights gained from studying this bacterium can help elucidate its potential applications in biotechnology and agriculture, particularly in enhancing digestive efficiency in livestock through microbial supplementation.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium AM28-23LB AM28-23LB.Scaf83, whole genome

Gene Summary

Adenine Count

659708 bp

Thymine Count

661971 bp

Guanine Count

803763 bp

Cytosine Count

811489 bp

Genome Length

2937492 bp

Protein-coding Genes

2803 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine deaminaseDW741_01085Not AvailableNegative223502 - 22398718455.2
abc transporter atp-binding proteinDW741_01090Not AvailableNegative224011 - 22467924534.6
hypothetical proteinDW741_01095Not AvailableNegative224735 - 2249326915.93
udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDW741_01105Not AvailableNegative226186 - 22726539951.3
abc transporter permeaseDW741_01110Not AvailableNegative227353 - 22996596166.4
abc transporter atp-binding proteinDW741_01115Not AvailableNegative229962 - 23064525380.8
sensor histidine kinaseDW741_01120Not AvailableNegative230772 - 23177037451.5
dna-binding response regulatorDW741_01125Not AvailableNegative231767 - 23245926168.6
yitt family proteinDW741_01130Not AvailablePositive232641 - 23348330086.4
hydrolaseDW741_01135Not AvailableNegative233644 - 23419520982.1

Displaying genes 221 – 230 of 326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.