Ruminococcaceae bacterium AM28-23LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium AM28-23LB is a member of the Ruminococcaceae family, known for its significance in various ecological and biological contexts. This bacterium is characterized by having a single replicon, which may suggest a streamlined genetic organization compared to other organisms that possess multiple replicons. The accession number for this bacterium is QUJM00000000.1, which provides a reference for its genomic data and aids in further research and identification within microbial databases. The Ruminococcaceae family is typically associated with the degradation of complex carbohydrates, contributing to the fermentation processes in the gastrointestinal tracts of various animals, particularly herbivores. The ecological role of Ruminococcaceae bacterium AM28-23LB could be significant in the context of gut microbiota, where it may participate in the breakdown of plant materials, thus facilitating nutrient absorption for its host. Understanding the traits of this bacterium can contribute to the broader knowledge of microbial communities and their functions in different environments, especially in relation to digestion and nutrient cycling. The insights gained from studying this bacterium can help elucidate its potential applications in biotechnology and agriculture, particularly in enhancing digestive efficiency in livestock through microbial supplementation.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium AM28-23LB AM28-23LB.Scaf83, whole genome

Gene Summary

Adenine Count

659708 bp

Thymine Count

661971 bp

Guanine Count

803763 bp

Cytosine Count

811489 bp

Genome Length

2937492 bp

Protein-coding Genes

2803 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonucleaseDW741_00780Not AvailableNegative163298 - 16519371036.7
ngofvii family restriction endonucleaseDW741_00785Not AvailableNegative165190 - 16625139313.8
dna cytosine methyltransferaseDW741_00790Not AvailableNegative166264 - 16737341334.6
recombinase family proteinDW741_00795Not AvailableNegative167573 - 16822925202.7
llm class flavin-dependent oxidoreductaseDW741_00800Not AvailableNegative168186 - 1684108420.09
xre family transcriptional regulatorDW741_00805Not AvailablePositive169036 - 16990532711.0
dna-binding proteinDW741_00810Not AvailablePositive170064 - 1702226086.54
hypothetical proteinDW741_00815Not AvailablePositive170251 - 17109032598.2
hypothetical proteinDW741_00820Not AvailablePositive171100 - 17203835671.6
res domain-containing proteinDW741_00825Not AvailablePositive172035 - 17313241680.2

Displaying genes 161 – 170 of 326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.