Clostridium sp. AM29-11AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM29-11AC is characterized by a single replicon, indicating a streamlined genetic structure typical of certain bacterial species within the Clostridium genus. The organism is cataloged under the accession number QUJI00000000.1, which provides a reference for its genomic data. As a member of the Clostridium genus, AM29-11AC is likely to exhibit traits associated with anaerobic metabolism, as many Clostridium species are known for their ability to thrive in oxygen-free environments. This trait is essential for their ecological roles, particularly in the decomposition of organic matter and nutrient cycling in various habitats, including soils and sediments. The presence of a single replicon suggests that Clostridium sp. AM29-11AC may possess a relatively simple genomic architecture, potentially influencing its adaptability and ecological interactions. The genomic characteristics can provide insights into its metabolic capabilities and ecological functions, although specific metabolic pathways or ecological roles of AM29-11AC are not provided in the data. In summary, Clostridium sp. AM29-11AC's single replicon status highlights its potential for specialized metabolic functions within anaerobic environments, contributing to ecological processes such as organic matter decomposition. This underscores the importance of understanding the genetic and functional diversity among Clostridium species for broader ecological and microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM29-11AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM29-11AC AM29-11AC.Scaf62, whole genome shotgun

Gene Summary

Adenine Count

883006 bp

Thymine Count

874334 bp

Guanine Count

890860 bp

Cytosine Count

899177 bp

Genome Length

3547659 bp

Protein-coding Genes

3213 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protease complex subunit prcb family proteinDW757_09545Not AvailableNegative2003543 - 200397115446.6
sporulation transcriptional regulator spoiiidDW757_09550Not AvailableNegative2004066 - 200434710507.6
sigma-54-dependent transcriptional regulatorDW757_09555Not AvailableNegative2004424 - 200622366960.2
four-carbon acid sugar kinase family proteinDW757_09560Not AvailablePositive2006437 - 200772045893.9
exo-alpha-sialidaseDW757_09565Not AvailablePositive2007750 - 200891043031.6
iron-containing alcohol dehydrogenaseDW757_09570Not AvailablePositive2008979 - 201014241755.6
4-hydroxy-tetrahydrodipicolinate synthaseDW757_09575Not AvailablePositive2010265 - 201117332370.0
4-hydroxythreonine-4-phosphate dehydrogenase pdxaDW757_09580Not AvailablePositive2011193 - 201226638826.5
membrane transport proteinDW757_09585Not AvailablePositive2012698 - 201397844757.5
2-dehydro-3-deoxyphosphogluconate aldolaseDW757_09590Not AvailablePositive2014027 - 201437412932.5

Displaying genes 1861 – 1870 of 2045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.