Clostridium sp. AM29-11AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM29-11AC is characterized by a single replicon, indicating a streamlined genetic structure typical of certain bacterial species within the Clostridium genus. The organism is cataloged under the accession number QUJI00000000.1, which provides a reference for its genomic data. As a member of the Clostridium genus, AM29-11AC is likely to exhibit traits associated with anaerobic metabolism, as many Clostridium species are known for their ability to thrive in oxygen-free environments. This trait is essential for their ecological roles, particularly in the decomposition of organic matter and nutrient cycling in various habitats, including soils and sediments. The presence of a single replicon suggests that Clostridium sp. AM29-11AC may possess a relatively simple genomic architecture, potentially influencing its adaptability and ecological interactions. The genomic characteristics can provide insights into its metabolic capabilities and ecological functions, although specific metabolic pathways or ecological roles of AM29-11AC are not provided in the data. In summary, Clostridium sp. AM29-11AC's single replicon status highlights its potential for specialized metabolic functions within anaerobic environments, contributing to ecological processes such as organic matter decomposition. This underscores the importance of understanding the genetic and functional diversity among Clostridium species for broader ecological and microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM29-11AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM29-11AC AM29-11AC.Scaf62, whole genome shotgun

Gene Summary

Adenine Count

883006 bp

Thymine Count

874334 bp

Guanine Count

890860 bp

Cytosine Count

899177 bp

Genome Length

3547659 bp

Protein-coding Genes

3213 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseDW757_08000Not AvailablePositive1677807 - 167860730548.2
hypothetical proteinDW757_08005Not AvailableNegative1678612 - 16788337558.02
nitroreductaseDW757_08010Not AvailableNegative1678799 - 167936520901.8
prd domain-containing proteinDW757_08015Not AvailablePositive1679714 - 168158871720.0
pts mannose transporter subunit iiabDW757_08020Not AvailablePositive1681609 - 168201315136.3
pts mannose/fructose/sorbose transporter subunit iibDW757_08025Not AvailablePositive1682166 - 168264218031.3
aminopeptidase p family proteinDW757_08030Not AvailablePositive1682654 - 168388646497.0
pts mannose transporter subunit iicdDW757_08035Not AvailablePositive1683929 - 168556958382.9
prolyl-trna synthetase associated domain-containing proteinDW757_08040Not AvailableNegative1685591 - 168615721542.0
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDW757_08045Not AvailableNegative1686613 - 168799551462.9

Displaying genes 1561 – 1570 of 2045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.