Clostridium sp. AM29-11AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM29-11AC is characterized by a single replicon, indicating a streamlined genetic structure typical of certain bacterial species within the Clostridium genus. The organism is cataloged under the accession number QUJI00000000.1, which provides a reference for its genomic data. As a member of the Clostridium genus, AM29-11AC is likely to exhibit traits associated with anaerobic metabolism, as many Clostridium species are known for their ability to thrive in oxygen-free environments. This trait is essential for their ecological roles, particularly in the decomposition of organic matter and nutrient cycling in various habitats, including soils and sediments. The presence of a single replicon suggests that Clostridium sp. AM29-11AC may possess a relatively simple genomic architecture, potentially influencing its adaptability and ecological interactions. The genomic characteristics can provide insights into its metabolic capabilities and ecological functions, although specific metabolic pathways or ecological roles of AM29-11AC are not provided in the data. In summary, Clostridium sp. AM29-11AC's single replicon status highlights its potential for specialized metabolic functions within anaerobic environments, contributing to ecological processes such as organic matter decomposition. This underscores the importance of understanding the genetic and functional diversity among Clostridium species for broader ecological and microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM29-11AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM29-11AC AM29-11AC.Scaf62, whole genome shotgun

Gene Summary

Adenine Count

883006 bp

Thymine Count

874334 bp

Guanine Count

890860 bp

Cytosine Count

899177 bp

Genome Length

3547659 bp

Protein-coding Genes

3213 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulatorDW757_06670Not AvailableNegative1380905 - 138183436391.1
hpt domain-containing proteinDW757_06675Not AvailableNegative1381988 - 138233812929.4
response regulatorDW757_06680Not AvailableNegative1382353 - 138345341693.2
pyridoxal phosphate-dependent aminotransferaseDW757_06685Not AvailableNegative1383567 - 138475445655.8
polc-type dna polymerase iiiDW757_06690Not AvailableNegative1384810 - 1389426173051.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDW757_06695Not AvailableNegative1389423 - 139050838376.1
rip metalloprotease rsepDW757_06700Not AvailableNegative1390649 - 139183643092.0
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDW757_06705Not AvailableNegative1391890 - 139303542034.0
phosphatidate cytidylyltransferaseDW757_06710Not AvailableNegative1393223 - 139402328625.0
isoprenyl transferaseDW757_06715Not AvailableNegative1394041 - 139476327425.0

Displaying genes 1301 – 1310 of 2045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.