Clostridium sp. AM29-11AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM29-11AC is characterized by a single replicon, indicating a streamlined genetic structure typical of certain bacterial species within the Clostridium genus. The organism is cataloged under the accession number QUJI00000000.1, which provides a reference for its genomic data. As a member of the Clostridium genus, AM29-11AC is likely to exhibit traits associated with anaerobic metabolism, as many Clostridium species are known for their ability to thrive in oxygen-free environments. This trait is essential for their ecological roles, particularly in the decomposition of organic matter and nutrient cycling in various habitats, including soils and sediments. The presence of a single replicon suggests that Clostridium sp. AM29-11AC may possess a relatively simple genomic architecture, potentially influencing its adaptability and ecological interactions. The genomic characteristics can provide insights into its metabolic capabilities and ecological functions, although specific metabolic pathways or ecological roles of AM29-11AC are not provided in the data. In summary, Clostridium sp. AM29-11AC's single replicon status highlights its potential for specialized metabolic functions within anaerobic environments, contributing to ecological processes such as organic matter decomposition. This underscores the importance of understanding the genetic and functional diversity among Clostridium species for broader ecological and microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM29-11AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM29-11AC AM29-11AC.Scaf62, whole genome shotgun

Gene Summary

Adenine Count

883006 bp

Thymine Count

874334 bp

Guanine Count

890860 bp

Cytosine Count

899177 bp

Genome Length

3547659 bp

Protein-coding Genes

3213 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ygiq family radical sam proteinDW757_06265Not AvailableNegative1310502 - 131250575760.7
pseudouridine synthaseDW757_06270Not AvailableNegative1312592 - 131401052660.5
sam-dependent methyltransferaseDW757_06275Not AvailableNegative1314010 - 131572264216.5
m23 family peptidaseDW757_06280Not AvailableNegative1315756 - 131655930276.7
hypothetical proteinDW757_06285Not AvailablePositive1316612 - 131762535742.6
vacuolar family h+-atpase subunit hDW757_06290Not AvailableNegative1317600 - 131818121715.5
pantetheine-phosphate adenylyltransferaseDW757_06295Not AvailableNegative1318206 - 131869718412.3
16s rrna (guanine(966)-n(2))-methyltransferase rsmdDW757_06300Not AvailableNegative1318720 - 131929221518.0
small acid-soluble spore proteinDW757_06305Not AvailablePositive1319662 - 13198687397.84
peptidoglycan editing factor pgefDW757_06310Not AvailableNegative1320083 - 132093431764.9

Displaying genes 1221 – 1230 of 2045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.