Clostridium sp. AM29-11AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM29-11AC is characterized by a single replicon, indicating a streamlined genetic structure typical of certain bacterial species within the Clostridium genus. The organism is cataloged under the accession number QUJI00000000.1, which provides a reference for its genomic data. As a member of the Clostridium genus, AM29-11AC is likely to exhibit traits associated with anaerobic metabolism, as many Clostridium species are known for their ability to thrive in oxygen-free environments. This trait is essential for their ecological roles, particularly in the decomposition of organic matter and nutrient cycling in various habitats, including soils and sediments. The presence of a single replicon suggests that Clostridium sp. AM29-11AC may possess a relatively simple genomic architecture, potentially influencing its adaptability and ecological interactions. The genomic characteristics can provide insights into its metabolic capabilities and ecological functions, although specific metabolic pathways or ecological roles of AM29-11AC are not provided in the data. In summary, Clostridium sp. AM29-11AC's single replicon status highlights its potential for specialized metabolic functions within anaerobic environments, contributing to ecological processes such as organic matter decomposition. This underscores the importance of understanding the genetic and functional diversity among Clostridium species for broader ecological and microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM29-11AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM29-11AC AM29-11AC.Scaf62, whole genome shotgun

Gene Summary

Adenine Count

883006 bp

Thymine Count

874334 bp

Guanine Count

890860 bp

Cytosine Count

899177 bp

Genome Length

3547659 bp

Protein-coding Genes

3213 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
haloacid dehalogenase-like hydrolaseDW757_06215Not AvailableNegative1298661 - 129957835263.9
lysr family transcriptional regulatorDW757_06220Not AvailableNegative1300210 - 130097728957.1
citrate transporterDW757_06225Not AvailablePositive1301206 - 130261248873.3
asparagine synthase (glutamine-hydrolyzing)DW757_06230Not AvailablePositive1302795 - 130464870430.4
winged helix dna-binding domain-containing proteinDW757_06235Not AvailableNegative1304685 - 130598348110.1
peptidase tDW757_06240Not AvailableNegative1306026 - 130725845407.1
holliday junction resolvase recuDW757_06245Not AvailableNegative1307292 - 130789123326.8
rlua family pseudouridine synthaseDW757_06250Not AvailableNegative1307855 - 130889238902.4
o-linked glcnac transferase-like proteinDW757_06255Not AvailableNegative1308892 - 130946121231.1
sdr family nad(p)-dependent oxidoreductaseDW757_06260Not AvailableNegative1309588 - 131050233217.4

Displaying genes 1211 – 1220 of 2045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.