Firmicutes bacterium AM29-6AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Family

Genus

Description

Firmicutes bacterium AM29-6AC is characterized by having a single replicon, which is a notable trait for its genomic structure. This bacterium is cataloged under the accession number QUJC00000000.1, which allows for its identification and reference in scientific databases. The Firmicutes phylum is known for its diverse members, often associated with various ecological niches, including soil, human gut, and various fermentation processes. While specific ecological or biological roles of Firmicutes bacterium AM29-6AC are not detailed within the available data, the presence of a single replicon may suggest a streamlined genome, potentially indicating an adaptation to its environment that could involve efficient energy usage or resource allocation. The significance of Firmicutes bacterium AM29-6AC could be further understood by considering the broader ecological implications of Firmicutes as a group. Many members of this phylum play crucial roles in the degradation of complex organic materials, contributing to nutrient cycling. Consequently, Firmicutes bacterium AM29-6AC may also participate in similar ecological processes, supporting its habitat's microbial community dynamics. Overall, the bacterium's genomic characteristics may reflect its adaptability and functional role within its ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Firmicutes bacterium AM29-6AC AM29-6AC.Scaf34, whole genome

Gene Summary

Adenine Count

655811 bp

Thymine Count

673338 bp

Guanine Count

576219 bp

Cytosine Count

628216 bp

Genome Length

2534489 bp

Protein-coding Genes

2331 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional chorismate mutase/prephenate dehydrataseDW773_11845Not AvailablePositive2390498 - 239163742352.9
type ii 3-dehydroquinate dehydrataseDW773_11850Not AvailablePositive2391642 - 239207615959.2
pyridoxal phosphate-dependent aminotransferaseDW773_11855Not AvailablePositive2392120 - 239331044296.9
transcriptional regulator mrazDW773_11860Not AvailablePositive2393629 - 239406016652.9
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDW773_11865Not AvailablePositive2394241 - 239518235130.1
hypothetical proteinDW773_11870Not AvailablePositive2395219 - 239575220594.4
pasta domain-containing proteinDW773_11875Not AvailablePositive2395759 - 239800282609.2
pasta domain-containing proteinDW773_11880Not AvailablePositive2398071 - 240001471370.5
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDW773_11885Not AvailablePositive2400159 - 240161352983.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDW773_11890Not AvailablePositive2401610 - 240299550334.0

Displaying genes 2331 – 2340 of 2478 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.