Clostridium sp. AM33-3

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM33-3 is characterized by possessing a single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and survival in various environments. This bacterium is cataloged under the accession number QUIV00000000.1, which serves as a reference for researchers seeking detailed genetic information. Clostridium species are known for their anaerobic metabolism, typically thriving in environments devoid of oxygen. They are often associated with a range of ecological niches, including soil, sediment, and the gastrointestinal tracts of animals. The specific ecological role of Clostridium sp. AM33-3 has not been detailed in the provided evidence; however, its classification within the genus suggests potential involvement in processes such as fermentation or decomposition. The presence of a single replicon may allow Clostridium sp. AM33-3 to efficiently regulate its genetic material, which can be advantageous in fluctuating environmental conditions. This trait could imply a focus on rapid growth and reproduction, which is often observed in Clostridium species. Understanding the genetic and ecological characteristics of Clostridium sp. AM33-3 contributes to a broader knowledge of microbial diversity and the functional roles these organisms play in their ecosystems. Their metabolic capabilities may impact nutrient cycling and the health of microbial communities, making them significant players in both ecological and biotechnological contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM33-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM33-3 AM33-3.Scaf56, whole genome shotgun

Gene Summary

Adenine Count

827412 bp

Thymine Count

822546 bp

Guanine Count

789330 bp

Cytosine Count

777906 bp

Genome Length

3217602 bp

Protein-coding Genes

2843 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnase j family beta-casp ribonucleaseDW819_13455Not AvailableNegative2801636 - 280363973477.6
duf1292 domain-containing proteinDW819_13460Not AvailableNegative2803879 - 280416911358.1
holliday junction resolvase ruvxDW819_13465Not AvailableNegative2804170 - 280458915724.2
ireb family regulatory phosphoproteinDW819_13470Not AvailableNegative2804690 - 28049509853.93
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDW819_13475Not AvailableNegative2804984 - 280631250608.5
hpr family phosphocarrier proteinDW819_13480Not AvailablePositive2806471 - 28067048631.52
trna 4-thiouridine(8) synthase thiiDW819_13485Not AvailableNegative2806772 - 280795344448.8
cysteine desulfuraseDW819_13490Not AvailableNegative2807974 - 280912841962.5
16s rrna (uracil(1498)-n(3))-methyltransferaseDW819_13495Not AvailableNegative2809147 - 280988427445.6
50s ribosomal protein l11 methyltransferaseDW819_13500Not AvailableNegative2809896 - 281085235268.8

Displaying genes 2611 – 2620 of 2994 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.