Clostridium sp. AM33-3

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM33-3 is characterized by possessing a single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and survival in various environments. This bacterium is cataloged under the accession number QUIV00000000.1, which serves as a reference for researchers seeking detailed genetic information. Clostridium species are known for their anaerobic metabolism, typically thriving in environments devoid of oxygen. They are often associated with a range of ecological niches, including soil, sediment, and the gastrointestinal tracts of animals. The specific ecological role of Clostridium sp. AM33-3 has not been detailed in the provided evidence; however, its classification within the genus suggests potential involvement in processes such as fermentation or decomposition. The presence of a single replicon may allow Clostridium sp. AM33-3 to efficiently regulate its genetic material, which can be advantageous in fluctuating environmental conditions. This trait could imply a focus on rapid growth and reproduction, which is often observed in Clostridium species. Understanding the genetic and ecological characteristics of Clostridium sp. AM33-3 contributes to a broader knowledge of microbial diversity and the functional roles these organisms play in their ecosystems. Their metabolic capabilities may impact nutrient cycling and the health of microbial communities, making them significant players in both ecological and biotechnological contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM33-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM33-3 AM33-3.Scaf56, whole genome shotgun

Gene Summary

Adenine Count

827412 bp

Thymine Count

822546 bp

Guanine Count

789330 bp

Cytosine Count

777906 bp

Genome Length

3217602 bp

Protein-coding Genes

2843 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium ion-translocating decarboxylase subunit betaDW819_04940Not AvailableNegative1045172 - 104632040218.6
biotin/lipoyl-binding proteinDW819_04945Not AvailableNegative1046360 - 104672211742.2
sodium pump decarboxylase subunit gammaDW819_04950Not AvailableNegative1046744 - 104752027748.3
carboxyl transferaseDW819_04955Not AvailableNegative1047538 - 104898651619.0
d-alanyl-d-alanine carboxypeptidaseDW819_04960Not AvailableNegative1049149 - 105050150304.5
dna polymerase ivDW819_04965Not AvailablePositive1050488 - 105181649674.4
rlua family pseudouridine synthaseDW819_04970Not AvailablePositive1051821 - 105272333922.7
duf1576 domain-containing proteinDW819_04975Not AvailablePositive1052847 - 105431353716.2
nol1/nop2/sun family putative rna methylaseDW819_04980Not AvailableNegative1054446 - 105588253587.0
hypothetical proteinDW819_04985Not AvailableNegative1056064 - 105646514077.0

Displaying genes 1091 – 1100 of 2994 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.