Ruminococcus sp. AM36-17

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM36-17 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This species has been cataloged under the accession QUIS00000000.1, which provides a reference for its genetic material. Notably, Ruminococcus sp. AM36-17 possesses a single replicon, indicating a simplified genomic structure that may influence its replication and gene expression mechanisms. The presence of flagella suggests that Ruminococcus sp. AM36-17 has the potential for motility, which could play a significant role in its ecological interactions, particularly in the digestive systems of ruminant animals where it may contribute to the fermentation of complex carbohydrates. This motility can facilitate the bacterium's ability to colonize specific niches within the gut environment, enhancing its survival and competitive advantage in the microbial community. In summary, the distinctive traits of Ruminococcus sp. AM36-17, including its Gram-positive cocci morphology, flagellar motility, and single replicon, highlight its potential functional roles in its ecological niche. Its ability to thrive in the complex ecosystem of the ruminant gut may be linked to its motility and genetic organization, underscoring the importance of these traits in microbial ecology and host interactions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM36-17
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM36-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM36-17 AM36-17.Scaf86, whole genome shotgun

Gene Summary

Adenine Count

1326070 bp

Thymine Count

1313229 bp

Guanine Count

921688 bp

Cytosine Count

898273 bp

Genome Length

4459680 bp

Protein-coding Genes

3900 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-70 family rna polymerase sigma factorDW842_02225Not AvailablePositive471250 - 47181022028.8
duf4179 domain-containing proteinDW842_02230Not AvailablePositive471807 - 47285940321.4
hypothetical proteinDW842_02235Not AvailablePositive473093 - 47355417141.5
hypothetical proteinDW842_02240Not AvailablePositive474027 - 47440113239.4
hypothetical proteinDW842_02245Not AvailablePositive474398 - 47477514559.6
sensor histidine kinaseDW842_02255Not AvailableNegative475131 - 47640847660.7
dna-binding response regulatorDW842_02260Not AvailablePositive476552 - 47722325448.8
carbohydrate abc transporter substrate-binding proteinDW842_02265Not AvailablePositive477290 - 47977690335.4
sugar abc transporter permeaseDW842_02270Not AvailablePositive479830 - 48077435459.1
carbohydrate abc transporter permeaseDW842_02275Not AvailablePositive480783 - 48165832324.7

Displaying genes 471 – 480 of 4040 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

9 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0007704N-acetyl-L-methionine sulfoneC7H12NO5SChemical structure of N-acetyl-L-methionine sulfoneNot available
Average222.24Da
Monoisotopic222.0441672Da
BASm0007705L-methionine sulfoximineC5H12N2O3SChemical structure of L-methionine sulfoximineNot available
Average180.22Da
Monoisotopic180.0568634Da
BASm0007706N-acetyl-L-methionine sulfoximineC7H13N2O4SChemical structure of N-acetyl-L-methionine sulfoximineNot available
Average221.25Da
Monoisotopic221.060151661Da
BASm0009321beta-D-fructose 1-phosphateC6H11O9PChemical structure of beta-D-fructose 1-phosphateNot available
Average258.12Da
Monoisotopic258.015166092Da

Displaying 1–9 of 9 metabolites

Health Effects

No health effects information available for this bacterium.