Clostridium sp. AM42-36

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM42-36 is characterized by having a single replicon, which indicates its bacterial genome is contained within one circular DNA molecule. This trait is typical of many members of the Clostridium genus, which are known for their anaerobic metabolism and ability to thrive in low-oxygen environments. The genomic data for Clostridium sp. AM42-36 is cataloged under the accession number QUIL00000000.1, providing a reference for further studies and comparative analyses within the Clostridium species. While specific phenotypic or ecological traits of Clostridium sp. AM42-36 are not provided, the presence of only one replicon suggests a streamlined genetic structure, which may contribute to its adaptability in various anaerobic niches. Clostridia are often involved in diverse ecological roles, including nutrient cycling and organic matter decomposition. This ecological insight highlights the potential importance of Clostridium sp. AM42-36 in its environment, as it may play a role in breaking down complex organic materials, thereby influencing soil health and nutrient availability. Understanding such microorganisms can be vital for applications in agriculture, biotechnology, and environmental management, where they may contribute to processes like bioremediation or the generation of biofuels.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM42-36
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM42-36 AM42-36.Scaf32, whole genome shotgun

Gene Summary

Adenine Count

901223 bp

Thymine Count

889310 bp

Guanine Count

713712 bp

Cytosine Count

675977 bp

Genome Length

3180488 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cpbp family intramembrane metalloproteaseDW920_04305Not AvailableNegative939102 - 93978826474.2
rna polymerase sporulation sigma factor sigkDW920_04310Not AvailablePositive939902 - 94052523905.7
collagenase-like proteaseDW920_04315Not AvailableNegative940497 - 94175647428.5
o-methyltransferaseDW920_04320Not AvailableNegative941830 - 94249825026.2
hypothetical proteinDW920_04325Not AvailableNegative942501 - 94296817479.0
ylbf family regulatorDW920_04330Not AvailableNegative942961 - 94329613397.7
ribonuclease jDW920_04335Not AvailableNegative943298 - 94495961068.9
duf1292 domain-containing proteinDW920_04340Not AvailableNegative944966 - 9452269832.17
holliday junction resolvase ruvxDW920_04345Not AvailableNegative945219 - 94565316318.7
ireb family regulatory phosphoproteinDW920_04350Not AvailableNegative945699 - 9459569740.53

Displaying genes 891 – 900 of 2982 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.