Clostridium sp. AM42-36

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM42-36 is characterized by having a single replicon, which indicates its bacterial genome is contained within one circular DNA molecule. This trait is typical of many members of the Clostridium genus, which are known for their anaerobic metabolism and ability to thrive in low-oxygen environments. The genomic data for Clostridium sp. AM42-36 is cataloged under the accession number QUIL00000000.1, providing a reference for further studies and comparative analyses within the Clostridium species. While specific phenotypic or ecological traits of Clostridium sp. AM42-36 are not provided, the presence of only one replicon suggests a streamlined genetic structure, which may contribute to its adaptability in various anaerobic niches. Clostridia are often involved in diverse ecological roles, including nutrient cycling and organic matter decomposition. This ecological insight highlights the potential importance of Clostridium sp. AM42-36 in its environment, as it may play a role in breaking down complex organic materials, thereby influencing soil health and nutrient availability. Understanding such microorganisms can be vital for applications in agriculture, biotechnology, and environmental management, where they may contribute to processes like bioremediation or the generation of biofuels.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM42-36
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM42-36 AM42-36.Scaf32, whole genome shotgun

Gene Summary

Adenine Count

901223 bp

Thymine Count

889310 bp

Guanine Count

713712 bp

Cytosine Count

675977 bp

Genome Length

3180488 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spore coat protein cotjbDW920_13600Not AvailablePositive2900384 - 290065010348.2
manganese catalase family proteinDW920_13605Not AvailablePositive2900651 - 290129224414.1
histidine phosphatase family proteinDW920_13610Not AvailableNegative2901386 - 290200624034.7
uracil-dna glycosylaseDW920_13615Not AvailableNegative2902081 - 290275525231.2
2-isopropylmalate synthaseDW920_13620Not AvailablePositive2903289 - 290495962582.4
hd domain-containing proteinDW920_13625Not AvailablePositive2905111 - 290620541726.0
hypothetical proteinDW920_13630Not AvailablePositive2906277 - 290740443325.1
spore protease yyacDW920_13635Not AvailableNegative2907386 - 290795220353.6
lysm peptidoglycan-binding domain-containing proteinDW920_13640Not AvailablePositive2908176 - 290939945669.4
hypothetical proteinDW920_13645Not AvailablePositive2909454 - 291077348558.0

Displaying genes 2671 – 2680 of 2982 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.