Clostridium sp. AM42-4

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM42-4 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for this organism is accessible under the accession number QUIK00000000.1, which facilitates further research and exploration of its genetic makeup. As a member of the genus Clostridium, this organism likely exhibits traits common to other species within this group, such as anaerobic metabolism and the ability to produce spores. These traits are significant as they enable Clostridium species to thrive in oxygen-deprived environments, which are typical in soils, sediments, and the gastrointestinal tracts of animals. The ecological insight regarding Clostridium sp. AM42-4 relates to its potential role in biogeochemical cycles, particularly in the degradation of organic matter and nutrient cycling within its habitat. The ability to survive and function in anaerobic conditions positions Clostridium sp. AM42-4 as a crucial player in the decomposition processes, contributing to the recycling of nutrients in ecosystems. In summary, the single replicon structure of Clostridium sp. AM42-4, alongside its association with anaerobic environments, underscores its potential ecological significance in organic matter decomposition and nutrient cycling. Further studies could elucidate its specific contributions to microbial community dynamics and ecosystem functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM42-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM42-4 AM42-4.Scaf63, whole genome shotgun

Gene Summary

Adenine Count

927412 bp

Thymine Count

972766 bp

Guanine Count

840273 bp

Cytosine Count

912186 bp

Genome Length

3653786 bp

Protein-coding Genes

3250 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW922_04565Not AvailableNegative1016293 - 101717732828.6
cell division protein ftszDW922_04570Not AvailableNegative1017425 - 101867843279.9
cell division protein ftsqDW922_04575Not AvailableNegative1018831 - 101955927556.5
udp-n-acetylglucosamine 1-carboxyvinyltransferaseDW922_04580Not AvailableNegative1019604 - 102085743866.9
cell division protein ftswDW922_04585Not AvailableNegative1020939 - 102207541431.5
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDW922_04590Not AvailableNegative1022086 - 102344149862.0
phospho-n-acetylmuramoyl-pentapeptide- transferaseDW922_04595Not AvailableNegative1023467 - 102443534919.0
peptidoglycan glycosyltransferaseDW922_04600Not AvailableNegative1024604 - 102638865602.9
penicillin-binding protein 2DW922_04605Not AvailableNegative1026501 - 102890686098.1
cell division protein ftslDW922_04610Not AvailableNegative1028968 - 102945018705.4

Displaying genes 921 – 930 of 3352 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.