Clostridium sp. AM42-4

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM42-4 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for this organism is accessible under the accession number QUIK00000000.1, which facilitates further research and exploration of its genetic makeup. As a member of the genus Clostridium, this organism likely exhibits traits common to other species within this group, such as anaerobic metabolism and the ability to produce spores. These traits are significant as they enable Clostridium species to thrive in oxygen-deprived environments, which are typical in soils, sediments, and the gastrointestinal tracts of animals. The ecological insight regarding Clostridium sp. AM42-4 relates to its potential role in biogeochemical cycles, particularly in the degradation of organic matter and nutrient cycling within its habitat. The ability to survive and function in anaerobic conditions positions Clostridium sp. AM42-4 as a crucial player in the decomposition processes, contributing to the recycling of nutrients in ecosystems. In summary, the single replicon structure of Clostridium sp. AM42-4, alongside its association with anaerobic environments, underscores its potential ecological significance in organic matter decomposition and nutrient cycling. Further studies could elucidate its specific contributions to microbial community dynamics and ecosystem functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM42-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM42-4 AM42-4.Scaf63, whole genome shotgun

Gene Summary

Adenine Count

927412 bp

Thymine Count

972766 bp

Guanine Count

840273 bp

Cytosine Count

912186 bp

Genome Length

3653786 bp

Protein-coding Genes

3250 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Main capsid proteinDW922_03800Not AvailablePositive849051 - 85001635679.9
Putative head-tail connector proteinDW922_03805Not AvailablePositive850031 - 85041714511.1
Hypothetical proteinDW922_03810Not AvailablePositive850422 - 85076012480.1
Putative minor capsid protein 2DW922_03815Not AvailablePositive850760 - 85112813869.4
Putative structural phage proteinDW922_03820Not AvailablePositive851200 - 85389996133.9
AttrNot AvailableNot AvailablePositive858372 - 858383Not Available
Putative phosphoadenosine phosphosulfate reductaseDW922_11500Not AvailablePositive2494014 - 249494735934.5
copg family transcriptional regulatorDW922_11505Not AvailablePositive2495007 - 24951776649.29
hypothetical proteinDW922_11510Not AvailablePositive2495274 - 24954688066.79
AttlNot AvailableNot AvailablePositive2495433 - 2495444Not Available

Displaying genes 31 – 40 of 3352 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.