Ruminococcus sp. AM45-2

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM45-2 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which suggests potential motility and adaptability within its environment. Notably, Ruminococcus sp. AM45-2 contains a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in growth and reproduction. The accession number for Ruminococcus sp. AM45-2 is QUIF00000000.1, which allows for further exploration and verification of its genetic and phenotypic characteristics in relevant databases. The presence of flagella may also imply that Ruminococcus sp. AM45-2 can navigate its ecological niche effectively, possibly enhancing its role in various microbiomes, particularly those associated with fermentation and digestion. Biologically, Ruminococcus species are often involved in the fermentation of complex carbohydrates, contributing significantly to the digestive processes in ruminants. This suggests that Ruminococcus sp. AM45-2 may play a crucial role in the breakdown of plant materials, which is essential for nutrient cycling in its ecosystem. Its motility, as indicated by the presence of flagella, may enhance its ability to colonize specific niches within the gut environment, thereby influencing microbial community dynamics and overall host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM45-2
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM45-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM45-2 AM45-2.Scaf136, whole genome shotgun

Gene Summary

Adenine Count

1338124 bp

Thymine Count

1359547 bp

Guanine Count

924359 bp

Cytosine Count

950959 bp

Genome Length

4573344 bp

Protein-coding Genes

3656 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yggs family pyridoxal phosphate-dependent enzymeDW953_07730Not AvailablePositive1570951 - 157165226037.5
rna-binding proteinDW953_07740Not AvailablePositive1572375 - 157308826876.2
3-dehydroquinate synthaseDW953_07745Not AvailablePositive1573116 - 157420740526.3
signal peptidase iiDW953_07750Not AvailablePositive1574204 - 157472819824.9
rlua family pseudouridine synthaseDW953_07755Not AvailablePositive1574733 - 157564734275.3
ai-2e family transporterDW953_07765Not AvailablePositive1576595 - 157805255775.9
hypothetical proteinDW953_07770Not AvailablePositive1578113 - 157964556728.7
acyl-coa thioesteraseDW953_07775Not AvailablePositive1579745 - 158017016777.2
integraseDW953_07780Not AvailablePositive1580506 - 158158841750.0
hypothetical proteinDW953_07785Not AvailableNegative1581762 - 15820199880.68

Displaying genes 1421 – 1430 of 3814 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.