Ruminococcus sp. AM45-2

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM45-2 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which suggests potential motility and adaptability within its environment. Notably, Ruminococcus sp. AM45-2 contains a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in growth and reproduction. The accession number for Ruminococcus sp. AM45-2 is QUIF00000000.1, which allows for further exploration and verification of its genetic and phenotypic characteristics in relevant databases. The presence of flagella may also imply that Ruminococcus sp. AM45-2 can navigate its ecological niche effectively, possibly enhancing its role in various microbiomes, particularly those associated with fermentation and digestion. Biologically, Ruminococcus species are often involved in the fermentation of complex carbohydrates, contributing significantly to the digestive processes in ruminants. This suggests that Ruminococcus sp. AM45-2 may play a crucial role in the breakdown of plant materials, which is essential for nutrient cycling in its ecosystem. Its motility, as indicated by the presence of flagella, may enhance its ability to colonize specific niches within the gut environment, thereby influencing microbial community dynamics and overall host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM45-2
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM45-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM45-2 AM45-2.Scaf136, whole genome shotgun

Gene Summary

Adenine Count

1338124 bp

Thymine Count

1359547 bp

Guanine Count

924359 bp

Cytosine Count

950959 bp

Genome Length

4573344 bp

Protein-coding Genes

3656 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseDW953_07025Not AvailablePositive1426995 - 142792135373.6
transposaseDW953_07030Not AvailablePositive1428249 - 142957751617.5
hypothetical proteinDW953_07035Not AvailableNegative1429800 - 143068732576.3
duf1700 domain-containing proteinDW953_07040Not AvailableNegative1430615 - 143122922666.3
padr family transcriptional regulatorDW953_07045Not AvailableNegative1431226 - 143154312155.5
hypothetical proteinDW953_07050Not AvailableNegative1431845 - 14320216627.23
hypothetical proteinDW953_07055Not AvailableNegative1432018 - 14322548541.7
lysr family transcriptional regulatorDW953_07060Not AvailableNegative1432256 - 143315834597.0
slc13/dass family transporterDW953_07065Not AvailablePositive1433554 - 143481944154.9
l(+)-tartrate dehydratase subunit alphaDW953_07070Not AvailablePositive1434965 - 143587032367.9

Displaying genes 1301 – 1310 of 3814 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.